BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H06LP1|AL425775
(778 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1322 1542 0.0
>3x_Contig1322
Length = 7535
Score = 1542 bits (778), Expect = 0.0
Identities = 778/778 (100%)
Strand = Plus / Minus
Query: 1 gatccactagcacgtactgttagaagaagactaaaacaaagaggtatcaccaagggcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2445 gatccactagcacgtactgttagaagaagactaaaacaaagaggtatcaccaagggcatt 2386
Query: 61 cctgctgtctttagtgcagagaaaccagatccaaaaaaggcaaaattattaccgttgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2385 cctgctgtctttagtgcagagaaaccagatccaaaaaaggcaaaattattaccgttgcca 2326
Query: 121 gaagaagaattccagaagggtaatgtggatcaactaagtgcattaaaggatttccgtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2325 gaagaagaattccagaagggtaatgtggatcaactaagtgcattaaaggatttccgtgtc 2266
Query: 181 agaattctacccgtcttgggaaccatgccaggtgtttttgggttgactattgctacttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2265 agaattctacccgtcttgggaaccatgccaggtgtttttgggttgactattgctacttgg 2206
Query: 241 gtcttatgtaagattagcggttacccaatggaaccaatagaaggtaagaacagaatcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 gtcttatgtaagattagcggttacccaatggaaccaatagaaggtaagaacagaatcaaa 2146
Query: 301 ttgtacgatggcatttatcaatccttagctggtcaaatgacgcgtattggtcaaaaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 ttgtacgatggcatttatcaatccttagctggtcaaatgacgcgtattggtcaaaaagac 2086
Query: 361 caaagaattccaattgcactaagtgacattggatacattgtggaggaagtgtggagaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2085 caaagaattccaattgcactaagtgacattggatacattgtggaggaagtgtggagaggt 2026
Query: 421 aaatcaccaatcagtaactattctactaggttaactttatccaaatgggatccaacaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2025 aaatcaccaatcagtaactattctactaggttaactttatccaaatgggatccaacaaag 1966
Query: 481 ccagtgagcattcaaaacgtcatactgctaaccaaagatgagcaaagggagcatgaagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1965 ccagtgagcattcaaaacgtcatactgctaaccaaagatgagcaaagggagcatgaagct 1906
Query: 541 agaatcttgaacggtaccgagacattttctgatgtatactctgaagaagctttagcaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1905 agaatcttgaacggtaccgagacattttctgatgtatactctgaagaagctttagcaatg 1846
Query: 601 attaataaaaggttccaagaagagttgtactattctcagttcaggtgaacgagattataa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1845 attaataaaaggttccaagaagagttgtactattctcagttcaggtgaacgagattataa 1786
Query: 661 gaggagaatacacttcgttgaaaatgttggctattggcataggttttcataccatttaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1785 gaggagaatacacttcgttgaaaatgttggctattggcataggttttcataccatttaag 1726
Query: 721 aatttttgtattctaagtttttaaacatcgtcaatatatgtacatatatatatccaac 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1725 aatttttgtattctaagtttttaaacatcgtcaatatatgtacatatatatatccaac 1668
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6315
Number of Sequences: 1807
Number of extensions: 6315
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 778
length of database: 10,358,551
effective HSP length: 16
effective length of query: 762
effective length of database: 10,329,639
effective search space: 7871184918
effective search space used: 7871184918
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)